Lipid structure

GM2

N-[(1s,2s)-2-hydroxy-1-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2h-pyran-2-yl]oxy}methyl)octadecyl]octadecanamide

Details

Molecular weight: 744.137 / Molecular formula: C43H85NO8

Image of the 2D molecular structure GM2

Isoforms

GM2 is a ligand in structures of these isoforms.

CD1a	CD1b	CD1c	CD1d
0	1	0	0

Lipid role

GM2 is an antigenic lipid in 1 structure.

Structures containing GM2

PDB code	Isoform	Antigenic lipid	Spacer lipid(s)	Receptors	Resolution
1GZP	CD1b	GM2 / C43H85NO8	TWT, D12		2.8Å

Machine readable representations for GM2

SMILES: CCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)[C@@H](O)CCCCCCCCCCCCCCCC

InChi Key: SYMIJCRAJBNLEL-YPQBUIQASA-N

InChi: InChI=1S/C43H85NO8/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-39(47)44-36(35-51-43-42(50)41(49)40(48)38(34-45)52-43)37(46)32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h36-38,40-43,45-46,48-50H,3-35H2,1-2H3,(H,44,47)/t36-,37-,38+,40+,41-,42+,43+/m0/s1